Taking an environmentally sensitive approach to pest management


Integrated Pest & Crop Management


Laura Sweets
University of Missouri
Plant Science & Technology
(573) 884-7307

Ear and Kernel Rots of Corn

Laura Sweets
University of Missouri
(573) 884-7307

Published: September 8, 2014

After a slow start because of unusually low soil temperatures and wet conditions, corn took off and has looked beautiful across most of the state for much of the season. With the spell of hot, dry weather late in August, it is turning and corn harvest is beginning or rapidly approaching in many parts of the state.

Diplodia ear rot, Penicillium ear rot, Gibb ear rot and Aspergillus species other than Aspergillus flavus are common problems year in and year out but the severity varies with weather conditions at pollination or close to harvest. Penicillium ear rot, Gibb ear rot and Aspergillus niger are particularly evident on the exposed tips of ears, around insect tunnels and on ears that have remained upright. If there are periods of wet weather before corn is harvested, some of the corn plants that died prematurely may show the black discoloration caused by secondary fungi coming in on the senescing plant tissues. Temperatures have been unusually cool through much of the season so the likelihood of problems with Aspergillus flavus and aflatoxin is low. Descriptions of the common ear and kernel rots of corn are given below. So far the levels of ear and kernel rots appear to be low. This could change if regions of the state move into a pattern with more frequent rains or heavy dews or if harvest is delayed due to wet conditions.

Ear with beginning stages of Diplodia ear rot

Diplodia ear rot with thick mat of mold growth

Fungal fruiting bodies evident as black flecks on kernels and cob tissues

Both Diplodia maydis and Diplodia macrospora can cause Diplodia ear rot of corn. The ear leaf and husks on the ear may appear prematurely bleached or straw-colored. When the husk is peeled back, dense white to grayish-white mold growth will be matted between the kernels and between the ear and the husks. Small, black fungal fruiting bodies may be scattered on husks or embedded in cob tissues and kernels. The entire ear may be grayish-brown, shrunken, very lightweight and completely rotted. Diplodia ear rot is favored by wet weather just after silking and is more severe when corn is planted following corn.

Penicillium erupting through pericarp of single kernel

Penicillium ear rot is usually evident as discrete tufts or clumps of a blue-green or gray-green mold erupting through the pericarp of individual kernels or on broken kernels. Penicillium appears as small, discrete colonies of mold growth with a dusty or powdery appearance. The fungus may actually invade the kernel giving the embryo a blue discoloration. Blue-eye is the term used for this blue discoloration of the embryo.

Penicillium ear rot

Penicillium and Aspergillus niger on tip of same ear

Gibb ear rot

Gibb ear rot (caused by Gibberella zeae) usually begins as a pinkish white mold at the tip of the ear. Early infected ears may rot completely with husks adhering tightly to the ear and a pinkish to reddish mold growing between husks and ears. Although mold growth usually has a pinkish to reddish color, it can appear yellow to yellow-orange to yellow-red or even primarily off-white. Gibb ear rot typically begins at the tip of the ear but under favorable conditions it can move down the ear causing extensive damage. It may also develop around injuries from hail, birds or insects.

Aspergillus niger on tip of ear

Aspergillus niger is also common on exposed ear tips. This fungus will be evident as black, powdery masses of spores on the tip of the ear or around insect tunnels.

Black corn occurs when any of a number of saprophytic or weakly parasitic fungi grow on corn plants in the field. Alternaria, Cladosporium, Aureobasidium and other species are frequently found on these discolored or black plants. Since the affected plants may have a sooty appearance these fungi are sometimes called sooty molds. These sooty molds or secondary fungi tend to develop on plants when wet or humid weather occurs as the crop is maturing or if harvest is delayed because of wet weather.

Black corn Black corn

Black corn

Typically these fungi come in on plants that are shaded, undersized, weakened or prematurely ripened and on senescing foliage. Plants that are lodged or that have been stressed by nutrient deficiencies, plant diseases or environmental conditions may be more severely affected. Although many of these fungi produce dark or black mold growth, the color of the mold growth can range for dark or black to olive green or even pink to white.

These secondary fungi tend to develop on senescing plant tissues, primarily leaf, stalk and husk tissue, but under favorable conditions can cause infection of the kernels. Infected kernels might show a black discoloration.

It is possible that these sooty molds or secondary fungi could contribute to stalk deterioration or stalk rot. Lodging could become a problem in these fields, especially if there are high winds or strong storms before harvest.

Aspergillus flavus colony on ear

Aspergillus flavus is evident as greenish-yellow to mustard yellow, felt-like growth on or between kernels, especially adjacent to or in insect damaged kernels. Aspergillus flavus is favored by high temperatures and dry conditions, so Aspergillus ear rot is typically associated with drought stress. The fungus survives in plant residues and in the soil and spores are spread by wind or insects to corn silks where the spores initiate infection.

Management of Ear and Kernel Rots: Little can be done to prevent or reduce the invasion of corn by fungi in the field. These ear and kernel rots tend to be more severe on ears with insect, bird, hail or other physical damage. Ears well covered by husks and maturing in a downward position usually have less rot than ears with open husks or ears maturing in an upright position. However, if ear and kernel rots developed in the field, it is important to harvest the field in a timely manner and to store the grain under the best possible conditions. Both Penicillium and Aspergillus can continue to develop on corn in storage if the grain is not stored at proper moisture content and temperatures. These two fungi can cause serious storage mold problems.

Adjust harvest equipment for minimum kernel damage and maximum cleaning. Before storing grain, clean bins thoroughly to remove dirt, dust and any grain left in or around bins. Thoroughly clean grain going into storage to remove chaff, other foreign material and cracked or broken kernels. Dry grain to 15% moisture as quickly as possible and monitor grain on a regular basis throughout storage life to insure moisture and temperature are maintained at correct levels. Protect grain from insects.

Stored grain should be monitored on a regular basis during the storage period to be certain storage molds are not developing in the grain mass. This will be especially important of grain stored in temporary storage structures.

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REVISED: September 30, 2015